Documentation

PhycoSight & ARTiMiS docs

Everything you need to run your instrument and make sense of the data it produces — from your first measurement on ARTiMiS to training a custom classifier in the cloud.

ARTiMiS Device

Set up your instrument and take your first measurements.

Getting Started Unbox your ARTiMiS, power it on with the included display and keyboard, and launch the control app from the desktop.First Sample Run A guided tour of the ARTiMiS control app and your first measurement, from live preview to results.External Storage Where your samples are saved, and how to use a USB drive for extra space and exporting.Troubleshooting Fixes for common issues with power, connecting to the app, preview, fluidics, storage, and how to report a problem.

PhycoSight App

Organize, analyze, and curate your data in the browser.

Start here

Getting started The three ways to work with your data — organize, analyze, and curate — and how they fit together.

Organizing data

Organizing your data Samples, series, and campaigns — what each is and when to use it.

Analysis

Explorer Browse, chart, and inspect the data you already have — and how it differs from Discovery.Discovery Atlases and constellations: surfacing structure you did not know to look for.

Curation

Annotations Labeling particles across label domains, with certainty and effective labels.Collections Curating particle sets, and how Collection, Compendium, and Dataset differ.Classification From compendium to dataset to a trained, deployable classification pipeline.

Administration

Devices Registering and managing your instruments.
Glossary Definitions for every concept you'll meet — campaigns, series, collections, constellations, and more.